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Genetic Regulation of Vascular Tissue Patterning in ArabidopsisFrancine M. Carland1,a, Barbara L. Berg1,2,b, Jonathan N. FitzGeraldb, Suchaya Jinamornphongsb, Timothy Nelsona, and Brian Keith3,ca Department of Molecular, Cellular, and Developmental Biology, Yale University, New Haven, Connecticut 06520-8104 b Department of Molecular Genetics and Cell Biology, University of Chicago, 1103 East 57th Street, Chicago, Illinois 60637 c Department of Medicine, University of Chicago, 5841 Maryland Avenue, Chicago, Illinois 60637 Correspondence to: Brian Keith, bkeith{at}mail.med.upenn.edu (E-mail), 215-746-5511 (fax)
Plants transport water and nutrients through a complex vascular network comprised of interconnected, specialized cell types organized in discrete bundles. To identify genetic determinants of vascular tissue patterning, we conducted a screen for mutants with altered vascular bundle organization in Arabidopsis cotyledons. Mutations in two genes, CVP1 and CVP2 (for cotyledon vascular pattern), specifically disrupt the normal pattern of vascular bundles in cotyledons, mature leaves, and inflorescence stems. The spatial distribution of the procambium, the precursor to mature vascular tissue, is altered in cvp1 and cvp2 embryos, suggesting that CVP1 and CVP2 act at a very early step in vascular patterning. Similarly, in developing stems of cvp1 and leaves of cvp2, the pattern of vascular differentiation is defective, but the maturation of individual vascular cells appears to be normal. There are no discernible alterations in cell morphology in cvp2 mutants. In contrast, cvp1 mutants are defective in directional orientation of the provascular strand, resulting in a failure to establish uniformly aligned vascular cells, and they also show a reduction in vascular cell elongation. Neither cvp1 nor cvp2 mutants displayed altered auxin perception, biosynthesis, or transport, suggesting that auxin metabolism is not generally affected in these mutants.
The development of a complex vascular network that transports water, minerals, photosynthate, and signal molecules is essential to plants growing in nonaquatic environments. The positional signals that specify vascular cell identity, and thereby generate this network, are currently unknown. However, the species-specific patterns of vascular tissues in plant tissues suggest that their spatial distribution is subject to genetic regulation.
Vascular systems in most plants are comprised of several distinct cell and tissue types, including xylem and phloem, which are primarily responsible for transporting water and organic compounds, respectively. These tissues differentiate as strands of elongated cells, which are connected end to end through specialized cell wall structures (
The molecular signals that induce the formation of the procambium in particular spatial patterns are not known. Clonal analysis of chimeric markers in several plant species has demonstrated that cell fate in plants is determined primarily by position and relies little on cell lineage (
Previous studies on vascular differentiation and patterning in plants have focused primarily on the effects of the growth regulator auxin (indole-3-acetic acid [IAA]; To investigate the extent of genetic regulation in vascular patterning in plants, we conducted a screen to identify Arabidopsis mutants specifically altered in this process. Here, we describe the identification, phenotypes, and genetic interactions of mutations in two genes that disrupt vascular bundle patterns in cotyledons, leaves, and inflorescence stems. The cvp (for cotyledon vascular pattern) mutants clearly possess altered vascular bundle patterns, yet their overall morphology appears essentially normal, and they display wild-type levels of free IAA, basipetal auxin transport, and sensitivity to exogenous auxin. These results suggest that the cvp mutants are defective in processes highly specific to vascular patterning. Moreover, cvp1 and cvp2 disrupt the distribution of procambial tissue as early as in embryonic cotyledons, suggesting that both genes act at a very early step in vascular patterning and differentiation.
Genetic Screen for Vascular Pattern Mutants To establish clearly the range of wild-type vascular patterns, we examined single excised fully expanded cotyledons from 272 Arabidopsis seedlings (ecotype Columbia). As shown in Figure 1, lignified xylem strands were clearly visible in whole-mount preparations (see Methods). The vascular pattern observed in wild-type cotyledons (Figure 1A) was strikingly similar, with four loops of xylem strands emanating from a midvein (242 of 272). In many cases, one or both strands comprising the two proximal loops appeared unconnected to the base of the midvein (157 of 242). A few cotyledons had two (nine of 272), three (20 of 272), or five (one of 272) "closed" loops. Given this small degree of variability, the wild-type cotyledon vascular pattern was defined conservatively as consisting of at least two closed loops of xylem strands.
To identify mutants, we dissected and examined single cotyledons from 34,040 seedlings from 10 different M2 pools for altered xylem strand patterns. Putative mutants (209) were transferred to soil and allowed to self-fertilize. M3 progeny from 29 of these M2 plants displayed mutant cotyledon xylem patterns, although many of these plants produced a mixture of mutant and wild-type phenotypes. Plants from most of the putative mutant lines also displayed other developmental defects, including sterility, misshapen leaves, loss of apical dominance, and markedly delayed flowering times. Two putative mutant lines were initially chosen for further study based on three criteria: (1) each showed expression of the mutant phenotype in all M3 seedlings (Figure 1B and Figure 1C); (2) the gross morphology and growth rate of the adult plants appeared normal (discussed below); and (3) the mutant phenotypes segregated as single recessive nuclear mutations in genetic crosses, as shown in Table 1. The genes identified by these mutations were named CVP1 and CVP2. F1 seedlings produced from genetic crosses between cvp1 and cvp2 mutant strains displayed wild-type vascular patterns, indicating that CVP1 and CVP2 represent different complementation groups (Table 1). Four different recessive mutant alleles of cvp1 and three different recessive mutant alleles of cvp2 have been identified and confirmed by complementation tests (see Methods). The different mutant alleles of CVP1 and CVP2 share characteristic phenotypes, although they differ in severity. We conducted all experiments described here with the first alleles identified for each gene.
Cotyledon Vascular Phenotypes of cvp1 and cvp2 Mutants
In cvp2 fully expanded cotyledons, all xylem strands appeared to be of normal thickness but contained additional lateral veins compared with wild-type cotyledons, and most (214 of 288) were characterized by the absence of closed distal loops (Figure 1C), which was not observed in wild-type cotyledons. cvp2 cotyledons that displayed two closed loops also showed additional branches of vascular bundles and were clearly distinguished from wild-type cotyledons (74 of 288). Additional "spurs" of xylem were also more prevalent in cvp2 cotyledons than in the wild type, resulting in a more highly reticulated pattern. Short stretches of isolated, apparently unconnected xylem strands were observed, although less frequently than in cvp1 mutants. The unconnected xylem strands in cvp1 and cvp2 mutants were not observed in cotyledons from wild-type plants. To determine whether the observed pattern of xylem strands coincided with the spatial pattern of phloem tissue, we stained cotyledons with aniline blue to visualize callose, which accumulates in phloem sieve cells (see Methods). As shown in Figure 2, fluorescence microscopy indicated that fluorescent strands, representing phloem tissue (Figure 2A, Figure 2C, and Figure 2E), showed a distribution similar to xylem strands (Figure 2B, Figure 2D, and Figure 2F) in both wild-type and cvp cotyledons. This result suggests that the effects of cvp1 and cvp2 mutations are not specific to xylem tissue, but appear to affect the vascular bundles as a whole, and therefore may act at an early step in vascular differentiation. In general, however, cvp1 and cvp2 seedlings appeared very similar in overall size and morphology to wild-type seedlings (Figure 3). The cotyledons (Figure 3A to 3C) and root growth (Figure 3E to 3G) were indistinguishable from the wild type. Moreover, cleared roots of cvp1 showed that the central vascular cylinder contained uniformly aligned vascular cells similar to wild-type roots (Figure 3I and Figure 3J). Root cell anatomy also was examined in transverse sections, revealing that cvp1 and wild-type cells were arranged similarly and were of similar size and shape (Figure 3K and Figure 3L). Based on wild-type appearance of the cvp mutants, aberrant vascular patterning does not appear to compromise photosynthetic competency.
A cvp1 cvp2 double mutant strain was identified by scoring the cotyledon vascular patterns of F2 seedlings segregating for both cvp1 and cvp2 mutations. To confirm the identity of the double mutant strain, we performed test crosses to single mutant tester strains, and the vascular patterns in cotyledons from F1 seedlings were scored to determine genetic complementation (Table 1). The phenotype of the double mutant appeared additive, in that the xylem strands contained additional cells but were more highly branched (Figure 1D), but nevertheless showed a seedling morphology indistinguishable from that of the wild type (Figure 3D and Figure 3H). The cotyledon phenotypes of cvp1 and the cvp1 cvp2 double mutants often were difficult to distinguish, however, which, in conjunction with the unknown molecular nature of the alleles, made the epistatic relationship between cvp1 and cvp2 unclear.
The cvp1 and cvp2 mutants were backcrossed to the wild-type Columbia strain and then crossed to the polymorphic Landsberg erecta strain. DNA from mutant F2 segregants was prepared and used to identify linked polymorphic markers (see Methods). Figure 4 shows that CVP1 and CVP2 both map to chromosome 1, at approximate positions 19 and 9 centimorgans, respectively. Break point analysis revealed that cvp1 is centromeric, and cvp2 telomeric, to the NCC1 molecular marker (
cvp Mutations Affect Establishment of Procambial Tissue in Cotyledons
To distinguish between these two models, we dissected developing embryos from wild-type and mutant seed pods (siliques) ~140 hr after fertilization and observed them in whole-mount preparations, as shown in Figure 5. At this stage in development, the procambial tissues have not begun differentiating into xylem and phloem, an event that initiates 36 hr after germination (
cvp Cotyledon Anatomy
Paradermal sections of cvp2 vascular bundles revealed no histological differences when compared with the wild type. Vascular cells of cvp2 cotyledons elongated appropriately and formed longitudinal files (Figure 6E). As predicted from the cleared cotyledon analysis, paradermal sections of cvp1 cvp2 double mutants exhibited characteristics of both mutants (Figure 6F). Isolated veins were observed in cvp1 and cvp1 cvp2 cotyledons (Figure 6F), representing the isolated tracheids that were observed in cleared sections. There were no indications that these isolated veins join a nearby vein, suggesting a discontinuous origin. These results further support our observation that the cvp are defective in the establishment of the vascular pattern at the procambial stage and not in the differentiation of vascular cells, because all stages of vascular differentiation are observed.
Figure 7 displays transverse sections through the lamina of wild-type (Figure 7A) and mutant cotyledons (Figure 7B to 7E) which indicate that the cvp1 and cvp2 mutations do not affect the internal anatomy of the cotyledon (Figure 7A to 7E). In 9-day-old cotyledons, mature xylem and phloem cells were observed within cvp mutant vascular bundles in the appropriate collateral arrangement, with xylem on the dorsal side and phloem on the ventral side (data not shown). One characteristic of cvp2 mutants is a failure to form closed loops (Figure 1C) such that lateral veins terminate freely within the spongy mesophyll, possibly resulting from a loss of guidance from the veins to which they normally would form a junction. In wild-type Arabidopsis, this event is restricted to veinlets, which terminate freely within an areole rather than connecting to an existing vein. This presumably is due to a loss of competence of the provascular strand to form a vein, although definitive proof has not been presented (
Phenotypes of Additional Organs in cvp Mutants To determine whether the cvp mutations are cotyledon specific or act more generally, we compared the vascular bundle patterns in the first true leaves of wild-type and cvp seedlings in whole-mount preparations (see Methods). Unlike the cotyledon venation pattern, the vascular pattern in cvp1 mutant leaves did not show any discontinuity or histological defects and was indistinguishable from that of the wild type, as shown in Figure 8A and Figure 8B. cvp2 and cvp1 cvp2 leaves (168 of 190) displayed unconnected xylem strands similar to those seen in cvp2 mutant cotyledons (Figure 8C and Figure 8D). Specifically, as deduced from a quantitative comparison between cleared wild-type and cvp2 leaves, 47% (475 of 1010) of cvp2 tertiary veins failed to connect to secondary (lateral) veins, and 97% (116 of 120) of cvp2 quaternary veins appeared as isolated veins (Figure 8C and Figure 8D). In wild-type leaves, intramarginal veins branch from secondary veins to generate extensions typically in the form of small closed loops (~80% of loops are closed; 356 of 440) along the margins of the leaf (Figure 8A). A cvp2 leaf at the same stage has ~50% fewer intramarginal veins, which rarely connect to form a closed loop (Figure 8C; 30 of 208). In cvp2 and cvp1 cvp2 leaves, there are fewer tertiary and quaternary veins, resulting in less reticulation compared with wild-type leaves (Figure 8C and Figure 8D). Consistent with our observations of mutant cotyledon morphology, the size and shape of leaves from cvp1 and cvp2 single mutant strains, as well as the double mutant strain, were indistinguishable from those of wild-type plants (Figure 8A to 8D). cvp2 cauline leaves (Figure 8E to 8H) and sepals (data not shown) also showed an increase in the number of free vein endings when compared with the wild type. These results indicate that the cvp2 mutation affects both embryonic and adult development.
An increase in the number of free vein endings may indicate a delay in vein initiation in cvp2 leaves. Studies of the embryonic patterns suggested that there was no delay in cvp2 vein initiation, because the procambial cell pattern, which establishes the final venation pattern, did not appear to be delayed when compared with the wild type (Figure 5). In addition, a consequence of delayed vein initiation in cvp2 leaves would be fewer vascular elements. This phenotype would have been apparent in whole-mount preparations but was not observed (Figure 1C, Figure 1D, and Figure 8). To investigate further the timing of cvp2 vein initiation, we conducted a detailed analysis by using the more amenable rosette leaf. A developmental stage analysis of wild-type and cvp2 first rosette leaves was performed by monitoring tracheary element lignification to determine whether cvp2 veins were initiated as they are in the wild type. Our observations of wild-type venation patterns in rosette leaves are in agreement with those of others ( A subtle but surprising phenotype was observed in the inflorescence stems of cvp1 mutants. The internode distance between siliques appeared less regular in cvp1 strains than in the wild type, and it was highly compact in ~10% of cvp1 inflorescence stems (7 of 68), as shown in Figure 9C. This shortened internode phenotype usually was observed at the apex of primary and secondary inflorescence stems and was not observed in cvp2 mutant strains. Histological analysis of stem sections from affected regions of inflorescence stems from cvp1 and cvp1 cvp2 double mutant plants showed an increased amount of vascular tissue, most notably xylem and lignified sclerenchyma, in the inflorescence stem (Figure 9B). The apparent overproduction of vascular tissue was observed only in regions displaying reduced internode distances, whereas the amount and organization of vascular tissue in unaffected regions were similar to those observed in wild-type stems (Figure 9A). These observations indicate that the internode spacing defects in cvp1 mutants correlate to alterations in vascular tissue differentiation. Interestingly, cvp1 cvp2 double mutant strains displayed a higher proportion of inflorescence stems bearing this compact internode phenotype (17 of 51), indicating that cvp2 mutations can enhance this phenotype in cvp1 genetic back-grounds.
Auxin Biosynthesis, Perception, and Transport Do Not Appear to Be Affected in the cvp Mutants
To assay directly for basipetal auxin transport in inflorescence stems of wild-type and cvp plants, we monitored the transport of 14C-labeled IAA through excised stem segments. Data in Figure 11 show that basipetal auxin transport is virtually identical in wild-type and mutant stems, indicating that polar auxin transport is not generally affected in the cvp mutants. These results, in addition to the overall wild-type appearance of cvp1 and cvp2 mutant plants, suggest that the cvp mutations do not cause gross alterations in auxin biosynthesis, perception, or polar auxin transport, although it remains possible that free IAA levels and rates of auxin transport are affected specifically in cotyledon vascular tissues in the cvp mutant strains.
The phenotypes of the cvp1 and cvp2 mutants suggest that aberrant vascular patterning is the primary defect in these plants. The general morphology and differentiation of epidermal and mesophyll cells in cvp1 and cvp2 mutant cotyledons appear identical to the wild type, despite the substantial alteration of vascular bundle patterns observed. Furthermore, vascular cell differentiation appears unaffected in the mutant veins, because all stages of differentiation are represented. It is not known whether water and nutrient transport are affected in cvp cotyledons or leaves, although the wild-type growth rate of these strains suggests that any effects must be relatively minor. The analysis of developing embryos indicates that cvp1 and cvp2 mutations disrupt the spatial arrangement of the procambium in developing cotyledons and therefore that the cvp mutations act at one of the earliest observable stages of vascular development. cvp1 mutants demonstrate a failure to promote cell axialization as characterized by misguided provascular strand formation, reduced cell elongation, and expanded, misshapen vascular cells. No such observable defect is detectable in cvp2 mutants. In addition to their effects on cotyledon vascular bundles, mutations in cvp1 and cvp2 cause alterations in the vasculature of vegetative leaves and/or inflorescence stems. It will be interesting to determine whether CVP1 and CVP2 disrupt procambium patterning in nonembryonic tissues in a manner similar to that observed in developing cotyledons. To follow this process, we have crossed various reporter genes expressed specifically in Arabidopsis procambial cells (F.M. Carland, N. Kho, and T. Nelson, unpublished data) into cvp1 and cvp2 mutant strains as molecular markers for procambium.
CVP1 and CVP2 may be involved in generating and/or perceiving positional signals that specify the spatial arrangement of procambium in developing tissues. cvp1 mutants have many similarities to mp mutants, with the exception that root development is unaffected. The recent molecular isolation of MP revealed that the gene is a member of the auxin response factor (ARF) gene family, which are transcription factors that have been shown to bind to functional auxin-responsive promoter elements of the AUX/IAA gene family ( cvp2 mutants are characterized by a failure of vascular bundles to form closed loops in the cotyledons and in foliar leaves. This observation suggests that there is an apparent loss of developing provascular strand guidance, possibly due to signaling defects, causing premature vein termination, and posits a role for CVP2 in promoting the progression of provascular strand formation. Based on the hypothesis (see below) that the polarized flow of auxin in a sourcesink manner is required to establish the venation pattern, CVP2 may be involved in the transduction or perception of auxin-mediated signals. Alternatively, CVP2 may be involved in an auxin-independent process. Elucidation of the molecular mechanisms by which CVP2 acts, however, awaits identification of its gene product.
A large body of evidence indicates that auxin transport plays an important role in the differentiation of vascular tissues in plants (
The canalization model accounts well for the differentiation of existing parenchyma cells into xylem and phloem in mature tissues but is less suitable in explaining procambial patterning during early development. It is intriguing that the expression pattern of MP parallels the postulated flow of auxin described in the canalization theory and may reflect the role of MP in mediating downstream auxin-inducible genes (
The ability of cvp2 mutant alleles to enhance the shortened internode phenotype observed in cvp1 mutant plants suggests that the products of these two genes interact. In addition, this interaction offers a means to identify other genes that control vascular development by screening for enhancers and suppressors of this phenotype in either cvp1 or cvp2 genetic backgrounds. Because we have identified four different mutant alleles of cvp1 and three different alleles of cvp2, it seems unlikely that we will identify many additional genes by using the screen described here. In addition, mutants that specifically affect foliar venation pattern without altering morphology have not been identified by using mutagenesis screens (
Plant Materials
Isolation and Genetic Characterization of cvp Mutants Genetic crosses were conducted by hand-pollinating emasculated immature flowers. Complementation analyses were performed by reciprocally crossing cvp1 and cvp2 plants and examining the cotyledon vascular patterns in the resulting F1 seedlings. Mutant alleles of each gene were considered to be different if they were isolated from independent M2 seed pools. A cvp1 cvp2 homozygous double mutant strain was obtained by crossing the homozygous single mutants to each other and scoring vascular phenotypes of the F2 generation (see text). The identity of the double mutant strain was confirmed by test crosses to homozygous cvp1 and cvp2 single mutant strains. The complementation test between mp and cvp1-1 was performed by crossing cvp1-1 homozygotes to mpT370 (kindly provided by T. Berleth, University of Toronto) heterozygous plants in reciprocal crosses. Two hundred and forty F1 plants from 24 independent crosses were scored and found to be wild type, indicating complementation between the two genes.
Histological Characterization For visualization of callose in phloem sieve tube elements, cotyledons were fixed for 1 hr in acetic acid:95% ethanol (1:3), treated in 2 M NaOH for 1 hr, neutralized briefly in 50 mM NaPO4, pH 6.8, and stained overnight in 0.005% aniline blue (Fisher Scientific) in 50 mM NaPO4, pH 6.8. Fluorescence under UV light was visualized with a Zeiss Axiophot microscope equipped with a broad-band filter to detect 4',6-diamidino-2-phenylindole. For histological analysis, cotyledons from wild-type and cvp plants were fixed in 4% glutaraldehyde (16 to 48 hr at 4°C), dehydrated through a graded ethanol series to 95% ethanol, and stained at room temperature for 16 hr in 0.1% eosin (in 95% ethanol) to assist with specimen visualization. Specimens then were dehydrated with 100% ethanol and embedded in Spurr's medium (EM Sciences, Ft. Washington, PA). Paradermal and transverse sections (1 µm) were cut on a Sorvall MT2-B ultramicrotome (Newtown, CT). Sections were stained briefly with filtered 1% toluidine blue. Because veins are oriented obliquely, only short stretches of veins are visible within each section. Through serial sections, the venation pattern of the cotyledons was reconstructed. In this manner, the position of mutant veins and the appearance of isolated veins were determined. Inflorescence stems from wild-type and cvp strains were sectioned (50 µm) on a Lancer Series 1000 Vibratome (Energy Beam Sciences, Agawam, MA); fixed in 50% ethanol, 10% acetic acid, and 5% formaldehyde for 15 min; and cleared of chlorophyll in 95% ethanol for 15 min. Sections were rehydrated through an ethanol series into water, stained with 0.1% toluidine blue, and photographed on a Zeiss Axiophot microscope.
Isolation of Embryos
Auxin Assays
Auxin transport was assayed in excised inflorescence stems of soil-grown wild-type and mutant plants by using the method of Mutant strains were tested for altered sensitivity or resistance to auxin (IAA) or to the auxin transport inhibitors 2,3,5-triiodobenzoic acid, 9-hydroxyfluorene-9-carboxylic acid, and trans-cinnamic acid (Sigma). Concentrated stock solutions of each compound were prepared in 95% ethanol and added to PNS medium over a range of concentrations. Wild-type and mutant seeds were transferred to the medium, and root lengths were measured after 10 days growth.
Genetic Mapping of cvp Mutations
1 These authors contributed equally to this work.
We are especially grateful for the expert technical assistance of Amy Matsumura, Raymond Ha, and David Tuch. We acknowledge assistance from Evelyn Havir (Connecticut Agricultural Experiment Station) with the free IAA assays. We thank Dr. Thomas Berleth (University of Toronto) for providing mpT370 seed. We also thank Drs. Daphne Preuss, Aaron Turkewitz, Celeste Simon (University of Chicago), and Neil McHale (Connecticut Agricultural Experiment Station) for a critical review of the manuscript. This work was supported in part by National Institutes of Health Grant No. GM50408 to B.K. and by U.S. Department of Agriculture Grant No. 96-35-304-3732 and National Science Foundation Grant No. IBN 9808295 to T.N. Received May 27, 1999; accepted September 6, 1999.
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